Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Gm37856-201ENSMUST00000191634 999 ntBASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom3Q9QXN0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.56■□□□□ 0.56
Shroom3Q9QXN0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Shroom3Q9QXN0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.56■□□□□ 0.56
Shroom3Q9QXN0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom3Q9QXN0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom3Q9QXN0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Mir7071-201ENSMUST00000184847 69 ntBASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom3Q9QXN0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom3Q9QXN0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom3Q9QXN0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.52■□□□□ 0.56
Shroom3Q9QXN0 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.52■□□□□ 0.56
Shroom3Q9QXN0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom3Q9QXN0 Gm8520-201ENSMUST00000186517 868 ntBASIC18.52■□□□□ 0.56
Shroom3Q9QXN0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
Shroom3Q9QXN0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom3Q9QXN0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.52■□□□□ 0.56
Shroom3Q9QXN0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shroom3Q9QXN0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Shroom3Q9QXN0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms