Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rfx5Q9JL61 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Gm12441-201ENSMUST00000121806 588 ntBASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
Rfx5Q9JL61 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfx5Q9JL61 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rfx5Q9JL61 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rfx5Q9JL61 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.55■□□□□ 0.72
Rfx5Q9JL61 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rfx5Q9JL61 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Gm22325-201ENSMUST00000158904 308 ntBASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rfx5Q9JL61 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Rfx5Q9JL61 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx5Q9JL61 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx5Q9JL61 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Rfx5Q9JL61 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.53■□□□□ 0.72
Rfx5Q9JL61 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx5Q9JL61 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx5Q9JL61 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx5Q9JL61 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rfx5Q9JL61 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx5Q9JL61 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx5Q9JL61 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx5Q9JL61 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx5Q9JL61 Gm44549-201ENSMUST00000208351 577 ntBASIC19.52■□□□□ 0.72
Rfx5Q9JL61 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rfx5Q9JL61 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rfx5Q9JL61 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rfx5Q9JL61 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx5Q9JL61 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rfx5Q9JL61 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rfx5Q9JL61 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rfx5Q9JL61 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rfx5Q9JL61 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfx5Q9JL61 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Gm12527-201ENSMUST00000117967 564 ntBASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms