Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1fQ9JIS7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Odf3b-204ENSMUST00000227834 930 ntBASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1fQ9JIS7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1fQ9JIS7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1fQ9JIS7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.16■□□□□ 0.98
Cacna1fQ9JIS7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1fQ9JIS7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Cacna1fQ9JIS7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cacna1fQ9JIS7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1fQ9JIS7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1fQ9JIS7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1fQ9JIS7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cacna1fQ9JIS7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1fQ9JIS7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1fQ9JIS7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1fQ9JIS7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Cacna1fQ9JIS7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1fQ9JIS7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1fQ9JIS7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cacna1fQ9JIS7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cacna1fQ9JIS7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cacna1fQ9JIS7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Cacna1fQ9JIS7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cacna1fQ9JIS7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.14■□□□□ 0.98
Cacna1fQ9JIS7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.14■□□□□ 0.98
Cacna1fQ9JIS7 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.14■□□□□ 0.98
Cacna1fQ9JIS7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1fQ9JIS7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cacna1fQ9JIS7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1fQ9JIS7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1fQ9JIS7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.13■□□□□ 0.97
Cacna1fQ9JIS7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.13■□□□□ 0.97
Cacna1fQ9JIS7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1fQ9JIS7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1fQ9JIS7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.13■□□□□ 0.97
Cacna1fQ9JIS7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1fQ9JIS7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.13■□□□□ 0.97
Cacna1fQ9JIS7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1fQ9JIS7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1fQ9JIS7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cacna1fQ9JIS7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1fQ9JIS7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1fQ9JIS7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1fQ9JIS7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1fQ9JIS7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1fQ9JIS7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1fQ9JIS7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1fQ9JIS7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Gm11539-201ENSMUST00000119837 557 ntBASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Gm13436-201ENSMUST00000120418 567 ntBASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Mir2861-201ENSMUST00000175539 82 ntBASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Gm30025-201ENSMUST00000218555 728 ntBASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1fQ9JIS7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.1■□□□□ 0.97
Cacna1fQ9JIS7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1fQ9JIS7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1fQ9JIS7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1fQ9JIS7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1fQ9JIS7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.1■□□□□ 0.97
Cacna1fQ9JIS7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1fQ9JIS7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms