Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubb3Q9ERD7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubb3Q9ERD7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Tubb3Q9ERD7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubb3Q9ERD7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tubb3Q9ERD7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tubb3Q9ERD7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubb3Q9ERD7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tubb3Q9ERD7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tubb3Q9ERD7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.33■□□□□ 0.52
Tubb3Q9ERD7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubb3Q9ERD7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Tubb3Q9ERD7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.33■□□□□ 0.52
Tubb3Q9ERD7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubb3Q9ERD7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubb3Q9ERD7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubb3Q9ERD7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubb3Q9ERD7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.29■□□□□ 0.52
Tubb3Q9ERD7 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.29■□□□□ 0.52
Tubb3Q9ERD7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tubb3Q9ERD7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubb3Q9ERD7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tubb3Q9ERD7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubb3Q9ERD7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubb3Q9ERD7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubb3Q9ERD7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubb3Q9ERD7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.28■□□□□ 0.52
Tubb3Q9ERD7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubb3Q9ERD7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tubb3Q9ERD7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tubb3Q9ERD7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms