Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Barx1Q9ER42 Flg-201ENSMUST00000050758 1488 ntBASIC16.64■□□□□ 0.25
Barx1Q9ER42 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Barx1Q9ER42 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.64■□□□□ 0.25
Barx1Q9ER42 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Barx1Q9ER42 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Barx1Q9ER42 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Barx1Q9ER42 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Barx1Q9ER42 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Barx1Q9ER42 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Barx1Q9ER42 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Gm6433-201ENSMUST00000118634 875 ntBASIC16.63■□□□□ 0.25
Barx1Q9ER42 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.63■□□□□ 0.25
Barx1Q9ER42 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Barx1Q9ER42 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Mir5122-201ENSMUST00000175004 89 ntBASIC16.62■□□□□ 0.25
Barx1Q9ER42 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.62■□□□□ 0.25
Barx1Q9ER42 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Barx1Q9ER42 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Barx1Q9ER42 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Barx1Q9ER42 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Barx1Q9ER42 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Barx1Q9ER42 Gm43799-201ENSMUST00000201845 579 ntBASIC16.61■□□□□ 0.25
Barx1Q9ER42 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Barx1Q9ER42 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Barx1Q9ER42 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.61■□□□□ 0.25
Barx1Q9ER42 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Barx1Q9ER42 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Barx1Q9ER42 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Barx1Q9ER42 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Barx1Q9ER42 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.59■□□□□ 0.25
Barx1Q9ER42 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.59■□□□□ 0.25
Barx1Q9ER42 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Barx1Q9ER42 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.59■□□□□ 0.25
Barx1Q9ER42 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.59■□□□□ 0.25
Barx1Q9ER42 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Barx1Q9ER42 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Barx1Q9ER42 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Barx1Q9ER42 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Barx1Q9ER42 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Barx1Q9ER42 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Barx1Q9ER42 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Barx1Q9ER42 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.58■□□□□ 0.25
Barx1Q9ER42 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.58■□□□□ 0.25
Barx1Q9ER42 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Barx1Q9ER42 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Barx1Q9ER42 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.58■□□□□ 0.24
Barx1Q9ER42 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.58■□□□□ 0.24
Barx1Q9ER42 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Barx1Q9ER42 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Barx1Q9ER42 Gm5417-201ENSMUST00000079706 384 ntBASIC16.58■□□□□ 0.24
Barx1Q9ER42 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Barx1Q9ER42 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms