Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Alkbh1-212ENSMUST00000185301 408 ntBASIC25.66■■□□□ 1.7
Cpsf1Q9EPU4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC25.66■■□□□ 1.7
Cpsf1Q9EPU4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cpsf1Q9EPU4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC25.66■■□□□ 1.7
Cpsf1Q9EPU4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC25.65■■□□□ 1.7
Cpsf1Q9EPU4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cpsf1Q9EPU4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Cpsf1Q9EPU4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cpsf1Q9EPU4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cpsf1Q9EPU4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cpsf1Q9EPU4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cpsf1Q9EPU4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cpsf1Q9EPU4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cpsf1Q9EPU4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cpsf1Q9EPU4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Cpsf1Q9EPU4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cpsf1Q9EPU4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cpsf1Q9EPU4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC25.64■■□□□ 1.69
Cpsf1Q9EPU4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Cpsf1Q9EPU4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC25.64■■□□□ 1.69
Cpsf1Q9EPU4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Gm10616-201ENSMUST00000205285 2127 ntBASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Gm44544-201ENSMUST00000207052 1844 ntBASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Gm18666-201ENSMUST00000190039 958 ntBASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC25.63■■□□□ 1.69
Cpsf1Q9EPU4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Gm13158-201ENSMUST00000122007 736 ntBASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Cpsf1Q9EPU4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Gm38308-201ENSMUST00000194934 1809 ntBASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cpsf1Q9EPU4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cpsf1Q9EPU4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cpsf1Q9EPU4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cpsf1Q9EPU4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Cpsf1Q9EPU4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cpsf1Q9EPU4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cpsf1Q9EPU4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC25.59■■□□□ 1.69
Cpsf1Q9EPU4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Cpsf1Q9EPU4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cpsf1Q9EPU4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cpsf1Q9EPU4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cpsf1Q9EPU4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cpsf1Q9EPU4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cpsf1Q9EPU4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.58■■□□□ 1.69
Cpsf1Q9EPU4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cpsf1Q9EPU4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Cpsf1Q9EPU4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC25.58■■□□□ 1.69
Cpsf1Q9EPU4 Gm38345-201ENSMUST00000192635 1748 ntBASIC25.58■■□□□ 1.69
Cpsf1Q9EPU4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cpsf1Q9EPU4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cpsf1Q9EPU4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Cpsf1Q9EPU4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC25.58■■□□□ 1.68
Cpsf1Q9EPU4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC25.58■■□□□ 1.68
Cpsf1Q9EPU4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf1Q9EPU4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Cpsf1Q9EPU4 AC153881.1-201ENSMUST00000214448 284 ntBASIC25.56■■□□□ 1.68
Cpsf1Q9EPU4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Cpsf1Q9EPU4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cpsf1Q9EPU4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cpsf1Q9EPU4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cpsf1Q9EPU4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cpsf1Q9EPU4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms