Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.94■□□□□ 0.78
Lysmd1Q9D0E3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.93■□□□□ 0.78
Lysmd1Q9D0E3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd1Q9D0E3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.93■□□□□ 0.78
Lysmd1Q9D0E3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Lysmd1Q9D0E3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd1Q9D0E3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.93■□□□□ 0.78
Lysmd1Q9D0E3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd1Q9D0E3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.93■□□□□ 0.78
Lysmd1Q9D0E3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd1Q9D0E3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Gm38027-201ENSMUST00000192315 235 ntBASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lysmd1Q9D0E3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd1Q9D0E3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.91■□□□□ 0.78
Lysmd1Q9D0E3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.91■□□□□ 0.78
Lysmd1Q9D0E3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd1Q9D0E3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd1Q9D0E3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd1Q9D0E3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lysmd1Q9D0E3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Gm11594-201ENSMUST00000122313 162 ntBASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Lysmd1Q9D0E3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Mir6349-201ENSMUST00000184059 97 ntBASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Gm27742-201ENSMUST00000184667 60 ntBASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Gm27459-201ENSMUST00000184860 107 ntBASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd1Q9D0E3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Gm11950-201ENSMUST00000121615 838 ntBASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Gm2213-201ENSMUST00000197485 688 ntBASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd1Q9D0E3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Gm13474-201ENSMUST00000122466 815 ntBASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Gm7791-201ENSMUST00000219066 539 ntBASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd1Q9D0E3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd1Q9D0E3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lysmd1Q9D0E3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd1Q9D0E3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd1Q9D0E3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd1Q9D0E3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd1Q9D0E3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd1Q9D0E3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd1Q9D0E3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd1Q9D0E3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms