Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim16Q99PP9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim16Q99PP9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.99■□□□□ 0.47
Trim16Q99PP9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.99■□□□□ 0.47
Trim16Q99PP9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.99■□□□□ 0.47
Trim16Q99PP9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim16Q99PP9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim16Q99PP9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.98■□□□□ 0.47
Trim16Q99PP9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim16Q99PP9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.97■□□□□ 0.47
Trim16Q99PP9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Gm13234-201ENSMUST00000120010 747 ntBASIC17.97■□□□□ 0.47
Trim16Q99PP9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim16Q99PP9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trim16Q99PP9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Trim16Q99PP9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim16Q99PP9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim16Q99PP9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim16Q99PP9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim16Q99PP9 Gm42778-201ENSMUST00000199644 553 ntBASIC17.96■□□□□ 0.47
Trim16Q99PP9 Gm42642-201ENSMUST00000200683 355 ntBASIC17.96■□□□□ 0.47
Trim16Q99PP9 Gm10033-202ENSMUST00000211874 928 ntBASIC17.96■□□□□ 0.47
Trim16Q99PP9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim16Q99PP9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trim16Q99PP9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim16Q99PP9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim16Q99PP9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Trim16Q99PP9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim16Q99PP9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim16Q99PP9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim16Q99PP9 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.94■□□□□ 0.46
Trim16Q99PP9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms