Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf111Q99ML9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rnf111Q99ML9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Rnf111Q99ML9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rnf111Q99ML9 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.87■□□□□ 0.45
Rnf111Q99ML9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf111Q99ML9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.87■□□□□ 0.45
Rnf111Q99ML9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.87■□□□□ 0.45
Rnf111Q99ML9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf111Q99ML9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf111Q99ML9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rnf111Q99ML9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf111Q99ML9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf111Q99ML9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Rnf111Q99ML9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf111Q99ML9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf111Q99ML9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf111Q99ML9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Gm7860-201ENSMUST00000121190 879 ntBASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf111Q99ML9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Gm9988-201ENSMUST00000069786 435 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms