Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cttnbp2nlQ99LJ0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm12922-201ENSMUST00000120626 809 ntBASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cttnbp2nlQ99LJ0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cttnbp2nlQ99LJ0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Spcs1-204ENSMUST00000226782 949 ntBASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cttnbp2nlQ99LJ0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cttnbp2nlQ99LJ0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cttnbp2nlQ99LJ0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cttnbp2nlQ99LJ0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cttnbp2nlQ99LJ0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms