Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vmp1Q99KU0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vmp1Q99KU0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Vmp1Q99KU0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vmp1Q99KU0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Vmp1Q99KU0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vmp1Q99KU0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Reep4-203ENSMUST00000226563 1444 ntBASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Gm13234-201ENSMUST00000120010 747 ntBASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Gm42569-201ENSMUST00000200539 472 ntBASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmp1Q99KU0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Vmp1Q99KU0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vmp1Q99KU0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vmp1Q99KU0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.75■□□□□ 0.43
Vmp1Q99KU0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.75■□□□□ 0.43
Vmp1Q99KU0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vmp1Q99KU0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Vmp1Q99KU0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.75■□□□□ 0.43
Vmp1Q99KU0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vmp1Q99KU0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Gm26571-201ENSMUST00000181399 666 ntBASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.74■□□□□ 0.43
Vmp1Q99KU0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vmp1Q99KU0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Gm10849-201ENSMUST00000100397 618 ntBASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 AV356131-201ENSMUST00000206201 750 ntBASIC17.73■□□□□ 0.43
Vmp1Q99KU0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.73■□□□□ 0.43
Vmp1Q99KU0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.72■□□□□ 0.43
Vmp1Q99KU0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.71■□□□□ 0.43
Vmp1Q99KU0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vmp1Q99KU0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms