Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Gm9847-201ENSMUST00000052528 599 ntBASIC18.37■□□□□ 0.53
Homer3Q99JP6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Homer3Q99JP6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.36■□□□□ 0.53
Homer3Q99JP6 Smad6-203ENSMUST00000179458 273 ntBASIC18.36■□□□□ 0.53
Homer3Q99JP6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Homer3Q99JP6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.35■□□□□ 0.53
Homer3Q99JP6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Homer3Q99JP6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.34■□□□□ 0.53
Homer3Q99JP6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.34■□□□□ 0.53
Homer3Q99JP6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.34■□□□□ 0.53
Homer3Q99JP6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Homer3Q99JP6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Homer3Q99JP6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Homer3Q99JP6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Homer3Q99JP6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Homer3Q99JP6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Homer3Q99JP6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Homer3Q99JP6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Homer3Q99JP6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Homer3Q99JP6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Homer3Q99JP6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Homer3Q99JP6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Homer3Q99JP6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Homer3Q99JP6 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.32■□□□□ 0.52
Homer3Q99JP6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Homer3Q99JP6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Homer3Q99JP6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Homer3Q99JP6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Homer3Q99JP6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms