Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm7290-201ENSMUST00000104990 617 ntBASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Gm12918-201ENSMUST00000120234 636 ntBASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Gm15710-201ENSMUST00000121821 636 ntBASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Gm5075-201ENSMUST00000196916 622 ntBASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha3Q91Y16 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Nespas-201ENSMUST00000143738 1083 ntBASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Gm10602-201ENSMUST00000098239 609 ntBASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha3Q91Y16 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha3Q91Y16 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha3Q91Y16 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha3Q91Y16 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha3Q91Y16 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha3Q91Y16 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.27■□□□□ 0.68
Pcdha3Q91Y16 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha3Q91Y16 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha3Q91Y16 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha3Q91Y16 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha3Q91Y16 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Mir5133-201ENSMUST00000174955 77 ntBASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha3Q91Y16 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha3Q91Y16 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha3Q91Y16 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha3Q91Y16 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms