Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha6Q91Y14 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha6Q91Y14 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Gm13234-201ENSMUST00000120010 747 ntBASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Gm13534-201ENSMUST00000121169 513 ntBASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdha6Q91Y14 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha6Q91Y14 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha6Q91Y14 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdha6Q91Y14 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdha6Q91Y14 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdha6Q91Y14 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.39■□□□□ 0.53
Pcdha6Q91Y14 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdha6Q91Y14 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha6Q91Y14 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdha6Q91Y14 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha6Q91Y14 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha6Q91Y14 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha6Q91Y14 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha6Q91Y14 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha6Q91Y14 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Pcdha6Q91Y14 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms