Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb20Q91XZ9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb20Q91XZ9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb20Q91XZ9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb20Q91XZ9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb20Q91XZ9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Gm20049-201ENSMUST00000219950 730 ntBASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb20Q91XZ9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms