Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb3Q91XZ7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Gm8493-201ENSMUST00000196881 489 ntBASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb3Q91XZ7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb3Q91XZ7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb3Q91XZ7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb3Q91XZ7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb3Q91XZ7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb3Q91XZ7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhb3Q91XZ7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb3Q91XZ7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Pcdhb3Q91XZ7 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.33■□□□□ 0.52
Pcdhb3Q91XZ7 Gm43017-201ENSMUST00000198296 752 ntBASIC18.33■□□□□ 0.52
Pcdhb3Q91XZ7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb3Q91XZ7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb3Q91XZ7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb3Q91XZ7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb3Q91XZ7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb3Q91XZ7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb3Q91XZ7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb3Q91XZ7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms