Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga4Q91XY4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga4Q91XY4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga4Q91XY4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga4Q91XY4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga4Q91XY4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhga4Q91XY4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Pcdhga4Q91XY4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhga4Q91XY4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhga4Q91XY4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Pcdhga4Q91XY4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhga4Q91XY4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Gm6420-201ENSMUST00000193885 723 ntBASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga4Q91XY4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhga4Q91XY4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga4Q91XY4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms