Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
StrcQ8VIM6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
StrcQ8VIM6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.36■■□□□ 1.17
StrcQ8VIM6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
StrcQ8VIM6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
StrcQ8VIM6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
StrcQ8VIM6 AC134329.2-201ENSMUST00000217897 428 ntBASIC22.35■■□□□ 1.17
StrcQ8VIM6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
StrcQ8VIM6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
StrcQ8VIM6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.35■■□□□ 1.17
StrcQ8VIM6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
StrcQ8VIM6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Mir2861-201ENSMUST00000175539 82 ntBASIC22.34■■□□□ 1.17
StrcQ8VIM6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
StrcQ8VIM6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
StrcQ8VIM6 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.33■■□□□ 1.17
StrcQ8VIM6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
StrcQ8VIM6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
StrcQ8VIM6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
StrcQ8VIM6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
StrcQ8VIM6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
StrcQ8VIM6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC22.33■■□□□ 1.16
StrcQ8VIM6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
StrcQ8VIM6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
StrcQ8VIM6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
StrcQ8VIM6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
StrcQ8VIM6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
StrcQ8VIM6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
StrcQ8VIM6 Gm12085-201ENSMUST00000119263 940 ntBASIC22.32■■□□□ 1.16
StrcQ8VIM6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
StrcQ8VIM6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
StrcQ8VIM6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
StrcQ8VIM6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
StrcQ8VIM6 Gm10654-201ENSMUST00000098653 1633 ntBASIC22.32■■□□□ 1.16
StrcQ8VIM6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
StrcQ8VIM6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
StrcQ8VIM6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
StrcQ8VIM6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
StrcQ8VIM6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
StrcQ8VIM6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
StrcQ8VIM6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
StrcQ8VIM6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
StrcQ8VIM6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
StrcQ8VIM6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
StrcQ8VIM6 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.31■■□□□ 1.16
StrcQ8VIM6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
StrcQ8VIM6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
StrcQ8VIM6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
StrcQ8VIM6 Gm7284-201ENSMUST00000131667 944 ntBASIC22.3■■□□□ 1.16
StrcQ8VIM6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
StrcQ8VIM6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
StrcQ8VIM6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
StrcQ8VIM6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
StrcQ8VIM6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
StrcQ8VIM6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
StrcQ8VIM6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
StrcQ8VIM6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
StrcQ8VIM6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
StrcQ8VIM6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
StrcQ8VIM6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
StrcQ8VIM6 Gm18101-201ENSMUST00000215769 548 ntBASIC22.28■■□□□ 1.16
StrcQ8VIM6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
StrcQ8VIM6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
StrcQ8VIM6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
StrcQ8VIM6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
StrcQ8VIM6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
StrcQ8VIM6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms