Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TraipQ8VIG6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Gm38285-201ENSMUST00000192928 922 ntBASIC19.66■□□□□ 0.74
TraipQ8VIG6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TraipQ8VIG6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.66■□□□□ 0.74
TraipQ8VIG6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.65■□□□□ 0.74
TraipQ8VIG6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TraipQ8VIG6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.65■□□□□ 0.74
TraipQ8VIG6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.65■□□□□ 0.74
TraipQ8VIG6 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.65■□□□□ 0.74
TraipQ8VIG6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TraipQ8VIG6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
TraipQ8VIG6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TraipQ8VIG6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.65■□□□□ 0.74
TraipQ8VIG6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TraipQ8VIG6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TraipQ8VIG6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TraipQ8VIG6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TraipQ8VIG6 Gm6576-201ENSMUST00000169678 883 ntBASIC19.64■□□□□ 0.73
TraipQ8VIG6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.64■□□□□ 0.73
TraipQ8VIG6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TraipQ8VIG6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TraipQ8VIG6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TraipQ8VIG6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TraipQ8VIG6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TraipQ8VIG6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TraipQ8VIG6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TraipQ8VIG6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TraipQ8VIG6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.62■□□□□ 0.73
TraipQ8VIG6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TraipQ8VIG6 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.62■□□□□ 0.73
TraipQ8VIG6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TraipQ8VIG6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TraipQ8VIG6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TraipQ8VIG6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TraipQ8VIG6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Gm10138-203ENSMUST00000206952 366 ntBASIC19.61■□□□□ 0.73
TraipQ8VIG6 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.61■□□□□ 0.73
TraipQ8VIG6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TraipQ8VIG6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Mir1199-201ENSMUST00000117015 119 ntBASIC19.6■□□□□ 0.73
TraipQ8VIG6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.6■□□□□ 0.73
TraipQ8VIG6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TraipQ8VIG6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TraipQ8VIG6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TraipQ8VIG6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TraipQ8VIG6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms