Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Q8VDP2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Q8VDP2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Q8VDP2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Q8VDP2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Q8VDP2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.98■□□□□ 0.47
Q8VDP2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q8VDP2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Q8VDP2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q8VDP2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Q8VDP2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q8VDP2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.97■□□□□ 0.47
Q8VDP2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q8VDP2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q8VDP2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Q8VDP2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.97■□□□□ 0.47
Q8VDP2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Q8VDP2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Q8VDP2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Q8VDP2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Q8VDP2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.96■□□□□ 0.47
Q8VDP2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Q8VDP2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.96■□□□□ 0.47
Q8VDP2 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.96■□□□□ 0.47
Q8VDP2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q8VDP2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Q8VDP2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Q8VDP2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Q8VDP2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.95■□□□□ 0.46
Q8VDP2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q8VDP2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.95■□□□□ 0.46
Q8VDP2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.95■□□□□ 0.46
Q8VDP2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q8VDP2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Q8VDP2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.95■□□□□ 0.46
Q8VDP2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.95■□□□□ 0.46
Q8VDP2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q8VDP2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Q8VDP2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Q8VDP2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q8VDP2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Q8VDP2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.94■□□□□ 0.46
Q8VDP2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Q8VDP2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.94■□□□□ 0.46
Q8VDP2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Q8VDP2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q8VDP2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Q8VDP2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Q8VDP2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.93■□□□□ 0.46
Q8VDP2 Gm43566-201ENSMUST00000196851 808 ntBASIC17.93■□□□□ 0.46
Q8VDP2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.93■□□□□ 0.46
Q8VDP2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Q8VDP2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q8VDP2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms