Protein–RNA interactions for Protein: Q8VBZ3

Clptm1, Cleft lip and palate transmembrane protein 1 homolog, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1Q8VBZ3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.79■□□□□ 0.6
Clptm1Q8VBZ3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Clptm1Q8VBZ3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clptm1Q8VBZ3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clptm1Q8VBZ3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clptm1Q8VBZ3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clptm1Q8VBZ3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Clptm1Q8VBZ3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Clptm1Q8VBZ3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clptm1Q8VBZ3 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.78■□□□□ 0.6
Clptm1Q8VBZ3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clptm1Q8VBZ3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Clptm1Q8VBZ3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clptm1Q8VBZ3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clptm1Q8VBZ3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clptm1Q8VBZ3 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.74■□□□□ 0.59
Clptm1Q8VBZ3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.73■□□□□ 0.59
Clptm1Q8VBZ3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Clptm1Q8VBZ3 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.72■□□□□ 0.59
Clptm1Q8VBZ3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Clptm1Q8VBZ3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clptm1Q8VBZ3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Clptm1Q8VBZ3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Clptm1Q8VBZ3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms