Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slf1Q8R3P9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.61■□□□□ 0.57
Slf1Q8R3P9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slf1Q8R3P9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.6■□□□□ 0.57
Slf1Q8R3P9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slf1Q8R3P9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.59■□□□□ 0.57
Slf1Q8R3P9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slf1Q8R3P9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Slf1Q8R3P9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slf1Q8R3P9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slf1Q8R3P9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slf1Q8R3P9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slf1Q8R3P9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slf1Q8R3P9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
Slf1Q8R3P9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slf1Q8R3P9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
Slf1Q8R3P9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Slf1Q8R3P9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slf1Q8R3P9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slf1Q8R3P9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slf1Q8R3P9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slf1Q8R3P9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slf1Q8R3P9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slf1Q8R3P9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Slf1Q8R3P9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms