Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.97■□□□□ 0.31
Rfc3Q8R323 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc3Q8R323 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.97■□□□□ 0.31
Rfc3Q8R323 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.96■□□□□ 0.31
Rfc3Q8R323 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc3Q8R323 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfc3Q8R323 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfc3Q8R323 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfc3Q8R323 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.96■□□□□ 0.3
Rfc3Q8R323 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfc3Q8R323 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rfc3Q8R323 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.95■□□□□ 0.3
Rfc3Q8R323 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc3Q8R323 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Gm12527-201ENSMUST00000117967 564 ntBASIC16.94■□□□□ 0.3
Rfc3Q8R323 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rfc3Q8R323 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.94■□□□□ 0.3
Rfc3Q8R323 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc3Q8R323 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfc3Q8R323 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc3Q8R323 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc3Q8R323 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfc3Q8R323 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc3Q8R323 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.93■□□□□ 0.3
Rfc3Q8R323 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.93■□□□□ 0.3
Rfc3Q8R323 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.93■□□□□ 0.3
Rfc3Q8R323 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc3Q8R323 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc3Q8R323 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rfc3Q8R323 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc3Q8R323 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc3Q8R323 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rfc3Q8R323 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Rfc3Q8R323 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rfc3Q8R323 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.92■□□□□ 0.3
Rfc3Q8R323 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms