Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
Cchcr1Q8K2I2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Reep4-203ENSMUST00000226563 1444 ntBASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cchcr1Q8K2I2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.08
Cchcr1Q8K2I2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.83■■□□□ 1.08
Cchcr1Q8K2I2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cchcr1Q8K2I2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cchcr1Q8K2I2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cchcr1Q8K2I2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cchcr1Q8K2I2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cchcr1Q8K2I2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cchcr1Q8K2I2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cchcr1Q8K2I2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cchcr1Q8K2I2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cchcr1Q8K2I2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cchcr1Q8K2I2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.81■■□□□ 1.08
Cchcr1Q8K2I2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cchcr1Q8K2I2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.8■■□□□ 1.08
Cchcr1Q8K2I2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cchcr1Q8K2I2 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.8■■□□□ 1.08
Cchcr1Q8K2I2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.8■■□□□ 1.08
Cchcr1Q8K2I2 Gm13534-201ENSMUST00000121169 513 ntBASIC21.8■■□□□ 1.08
Cchcr1Q8K2I2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cchcr1Q8K2I2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.8■■□□□ 1.08
Cchcr1Q8K2I2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Cchcr1Q8K2I2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cchcr1Q8K2I2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Grk6-206ENSMUST00000224995 2971 ntBASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.79■■□□□ 1.08
Cchcr1Q8K2I2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 Gm13234-201ENSMUST00000120010 747 ntBASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms