Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rp1l1Q8CGM2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rp1l1Q8CGM2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Rp1l1Q8CGM2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rp1l1Q8CGM2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rp1l1Q8CGM2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rp1l1Q8CGM2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rp1l1Q8CGM2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rp1l1Q8CGM2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rp1l1Q8CGM2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rp1l1Q8CGM2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rp1l1Q8CGM2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Gm45058-201ENSMUST00000205810 766 ntBASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rp1l1Q8CGM2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
Rp1l1Q8CGM2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.35■□□□□ 0.69
Rp1l1Q8CGM2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rp1l1Q8CGM2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rp1l1Q8CGM2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rp1l1Q8CGM2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rp1l1Q8CGM2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rp1l1Q8CGM2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rp1l1Q8CGM2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rp1l1Q8CGM2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.35■□□□□ 0.69
Rp1l1Q8CGM2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rp1l1Q8CGM2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rp1l1Q8CGM2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rp1l1Q8CGM2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rp1l1Q8CGM2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rp1l1Q8CGM2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rp1l1Q8CGM2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Rp1l1Q8CGM2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.34■□□□□ 0.69
Rp1l1Q8CGM2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rp1l1Q8CGM2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.33■□□□□ 0.69
Rp1l1Q8CGM2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rp1l1Q8CGM2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rp1l1Q8CGM2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rp1l1Q8CGM2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rp1l1Q8CGM2 Gm12085-201ENSMUST00000119263 940 ntBASIC19.33■□□□□ 0.68
Rp1l1Q8CGM2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rp1l1Q8CGM2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms