Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rab43Q8CG50 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab43Q8CG50 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18■□□□□ 0.47
Rab43Q8CG50 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab43Q8CG50 AL672049.1-201ENSMUST00000197943 91 ntBASIC18■□□□□ 0.47
Rab43Q8CG50 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18■□□□□ 0.47
Rab43Q8CG50 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab43Q8CG50 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab43Q8CG50 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Rab43Q8CG50 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Gm13836-201ENSMUST00000121159 501 ntBASIC17.99■□□□□ 0.47
Rab43Q8CG50 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab43Q8CG50 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Mir1199-201ENSMUST00000117015 119 ntBASIC17.98■□□□□ 0.47
Rab43Q8CG50 Gm11927-201ENSMUST00000118472 759 ntBASIC17.98■□□□□ 0.47
Rab43Q8CG50 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rab43Q8CG50 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab43Q8CG50 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab43Q8CG50 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab43Q8CG50 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab43Q8CG50 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.97■□□□□ 0.47
Rab43Q8CG50 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab43Q8CG50 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rab43Q8CG50 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rab43Q8CG50 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.95■□□□□ 0.46
Rab43Q8CG50 Gm7977-201ENSMUST00000193787 748 ntBASIC17.95■□□□□ 0.46
Rab43Q8CG50 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab43Q8CG50 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab43Q8CG50 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab43Q8CG50 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rab43Q8CG50 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab43Q8CG50 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rab43Q8CG50 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab43Q8CG50 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.94■□□□□ 0.46
Rab43Q8CG50 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.94■□□□□ 0.46
Rab43Q8CG50 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.94■□□□□ 0.46
Rab43Q8CG50 Gm37055-201ENSMUST00000191866 133 ntBASIC17.94■□□□□ 0.46
Rab43Q8CG50 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab43Q8CG50 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms