Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vcpip1Q8CDG3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Vcpip1Q8CDG3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vcpip1Q8CDG3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Gm42569-201ENSMUST00000200539 472 ntBASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vcpip1Q8CDG3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vcpip1Q8CDG3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vcpip1Q8CDG3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.76■□□□□ 0.75
Vcpip1Q8CDG3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Gm27405-201ENSMUST00000184201 112 ntBASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vcpip1Q8CDG3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms