Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ptcd1Q8C2E4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Ptcd1Q8C2E4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ptcd1Q8C2E4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ptcd1Q8C2E4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ptcd1Q8C2E4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Ptcd1Q8C2E4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.23
Ptcd1Q8C2E4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Ptcd1Q8C2E4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ptcd1Q8C2E4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ptcd1Q8C2E4 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.74■■□□□ 1.23
Ptcd1Q8C2E4 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.74■■□□□ 1.23
Ptcd1Q8C2E4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ptcd1Q8C2E4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.74■■□□□ 1.23
Ptcd1Q8C2E4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptcd1Q8C2E4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptcd1Q8C2E4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptcd1Q8C2E4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ptcd1Q8C2E4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Gm21362-201ENSMUST00000194272 928 ntBASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Gm10819-201ENSMUST00000099988 561 ntBASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ptcd1Q8C2E4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptcd1Q8C2E4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptcd1Q8C2E4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptcd1Q8C2E4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptcd1Q8C2E4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptcd1Q8C2E4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptcd1Q8C2E4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ptcd1Q8C2E4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ptcd1Q8C2E4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Ptcd1Q8C2E4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ptcd1Q8C2E4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.69■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms