Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm5075-201ENSMUST00000196916 622 ntBASIC17.34■□□□□ 0.37
Ska3Q8C263 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Ska3Q8C263 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ska3Q8C263 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ska3Q8C263 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ska3Q8C263 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.34■□□□□ 0.37
Ska3Q8C263 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.34■□□□□ 0.37
Ska3Q8C263 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ska3Q8C263 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ska3Q8C263 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ska3Q8C263 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ska3Q8C263 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ska3Q8C263 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ska3Q8C263 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ska3Q8C263 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.33■□□□□ 0.37
Ska3Q8C263 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ska3Q8C263 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ska3Q8C263 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ska3Q8C263 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ska3Q8C263 Gm12933-201ENSMUST00000120203 872 ntBASIC17.33■□□□□ 0.36
Ska3Q8C263 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.33■□□□□ 0.36
Ska3Q8C263 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Ska3Q8C263 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.33■□□□□ 0.36
Ska3Q8C263 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ska3Q8C263 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ska3Q8C263 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ska3Q8C263 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ska3Q8C263 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ska3Q8C263 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ska3Q8C263 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.32■□□□□ 0.36
Ska3Q8C263 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ska3Q8C263 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ska3Q8C263 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.32■□□□□ 0.36
Ska3Q8C263 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ska3Q8C263 Gm6365-201ENSMUST00000054711 744 ntBASIC17.32■□□□□ 0.36
Ska3Q8C263 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.32■□□□□ 0.36
Ska3Q8C263 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ska3Q8C263 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ska3Q8C263 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska3Q8C263 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska3Q8C263 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ska3Q8C263 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.31■□□□□ 0.36
Ska3Q8C263 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska3Q8C263 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.31■□□□□ 0.36
Ska3Q8C263 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska3Q8C263 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.31■□□□□ 0.36
Ska3Q8C263 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ska3Q8C263 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.31■□□□□ 0.36
Ska3Q8C263 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ska3Q8C263 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.31■□□□□ 0.36
Ska3Q8C263 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ska3Q8C263 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ska3Q8C263 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ska3Q8C263 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.3■□□□□ 0.36
Ska3Q8C263 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ska3Q8C263 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.3■□□□□ 0.36
Ska3Q8C263 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ska3Q8C263 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ska3Q8C263 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.29■□□□□ 0.36
Ska3Q8C263 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.29■□□□□ 0.36
Ska3Q8C263 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.29■□□□□ 0.36
Ska3Q8C263 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.29■□□□□ 0.36
Ska3Q8C263 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ska3Q8C263 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.28■□□□□ 0.36
Ska3Q8C263 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ska3Q8C263 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms