Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3rf2Q8BZT2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3rf2Q8BZT2 Flg-201ENSMUST00000050758 1488 ntBASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3rf2Q8BZT2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3rf2Q8BZT2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Gm13158-201ENSMUST00000122007 736 ntBASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3rf2Q8BZT2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Gm11927-201ENSMUST00000118472 759 ntBASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Gm22325-201ENSMUST00000158904 308 ntBASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Sh3rf2Q8BZT2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Gm10698-201ENSMUST00000182663 604 ntBASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3rf2Q8BZT2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms