Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC26.22■■□□□ 1.79
Usp47Q8BY87 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC26.21■■□□□ 1.79
Usp47Q8BY87 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC26.21■■□□□ 1.79
Usp47Q8BY87 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Usp47Q8BY87 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Usp47Q8BY87 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Usp47Q8BY87 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Usp47Q8BY87 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Usp47Q8BY87 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Usp47Q8BY87 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp47Q8BY87 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC26.2■■□□□ 1.78
Usp47Q8BY87 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC26.2■■□□□ 1.78
Usp47Q8BY87 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp47Q8BY87 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC26.2■■□□□ 1.78
Usp47Q8BY87 Gm15847-201ENSMUST00000121417 1065 ntBASIC26.2■■□□□ 1.78
Usp47Q8BY87 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp47Q8BY87 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Usp47Q8BY87 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Usp47Q8BY87 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Usp47Q8BY87 Gm43231-201ENSMUST00000202960 2258 ntBASIC26.19■■□□□ 1.78
Usp47Q8BY87 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Usp47Q8BY87 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Usp47Q8BY87 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Usp47Q8BY87 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Golph3-205ENSMUST00000228671 2842 ntBASIC26.18■■□□□ 1.78
Usp47Q8BY87 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Gm8520-201ENSMUST00000186517 868 ntBASIC26.18■■□□□ 1.78
Usp47Q8BY87 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC26.18■■□□□ 1.78
Usp47Q8BY87 Gm45906-201ENSMUST00000208911 1430 ntBASIC26.18■■□□□ 1.78
Usp47Q8BY87 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Usp47Q8BY87 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Usp47Q8BY87 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Usp47Q8BY87 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Usp47Q8BY87 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Usp47Q8BY87 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC26.16■■□□□ 1.78
Usp47Q8BY87 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp47Q8BY87 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Usp47Q8BY87 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp47Q8BY87 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC26.16■■□□□ 1.78
Usp47Q8BY87 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp47Q8BY87 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Usp47Q8BY87 AC163280.1-201ENSMUST00000228194 1100 ntBASIC26.16■■□□□ 1.78
Usp47Q8BY87 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Usp47Q8BY87 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Usp47Q8BY87 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp47Q8BY87 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
Usp47Q8BY87 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Usp47Q8BY87 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Usp47Q8BY87 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Usp47Q8BY87 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Usp47Q8BY87 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Usp47Q8BY87 Gm11927-201ENSMUST00000118472 759 ntBASIC26.15■■□□□ 1.78
Usp47Q8BY87 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Usp47Q8BY87 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC26.15■■□□□ 1.78
Usp47Q8BY87 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Usp47Q8BY87 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Usp47Q8BY87 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Usp47Q8BY87 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Usp47Q8BY87 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Usp47Q8BY87 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Usp47Q8BY87 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC26.14■■□□□ 1.78
Usp47Q8BY87 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC26.14■■□□□ 1.78
Usp47Q8BY87 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Usp47Q8BY87 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Usp47Q8BY87 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC26.14■■□□□ 1.77
Usp47Q8BY87 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Usp47Q8BY87 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Usp47Q8BY87 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Usp47Q8BY87 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Usp47Q8BY87 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC26.13■■□□□ 1.77
Usp47Q8BY87 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Usp47Q8BY87 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Usp47Q8BY87 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp47Q8BY87 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Usp47Q8BY87 Gm22240-201ENSMUST00000175225 82 ntBASIC26.12■■□□□ 1.77
Usp47Q8BY87 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp47Q8BY87 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp47Q8BY87 Iqck-206ENSMUST00000208658 2891 ntBASIC26.12■■□□□ 1.77
Usp47Q8BY87 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp47Q8BY87 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp47Q8BY87 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Usp47Q8BY87 Flg-201ENSMUST00000050758 1488 ntBASIC26.11■■□□□ 1.77
Usp47Q8BY87 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Usp47Q8BY87 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Usp47Q8BY87 Gm5643-201ENSMUST00000117081 966 ntBASIC26.11■■□□□ 1.77
Usp47Q8BY87 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Usp47Q8BY87 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
Usp47Q8BY87 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Usp47Q8BY87 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Usp47Q8BY87 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Usp47Q8BY87 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms