Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup54Q8BTS4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nup54Q8BTS4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.94■□□□□ 0.62
Nup54Q8BTS4 Golph3-205ENSMUST00000228671 2842 ntBASIC18.94■□□□□ 0.62
Nup54Q8BTS4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup54Q8BTS4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup54Q8BTS4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Gm22325-201ENSMUST00000158904 308 ntBASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.91■□□□□ 0.62
Nup54Q8BTS4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Gm44549-201ENSMUST00000208351 577 ntBASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup54Q8BTS4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nup54Q8BTS4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Nup54Q8BTS4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nup54Q8BTS4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Nup54Q8BTS4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.89■□□□□ 0.61
Nup54Q8BTS4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nup54Q8BTS4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup54Q8BTS4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup54Q8BTS4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup54Q8BTS4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup54Q8BTS4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup54Q8BTS4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nup54Q8BTS4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup54Q8BTS4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup54Q8BTS4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup54Q8BTS4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup54Q8BTS4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup54Q8BTS4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup54Q8BTS4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nup54Q8BTS4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.86■□□□□ 0.61
Nup54Q8BTS4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms