Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne3Q8BT60 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne3Q8BT60 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpne3Q8BT60 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpne3Q8BT60 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Gm38205-201ENSMUST00000192243 258 ntBASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpne3Q8BT60 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpne3Q8BT60 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cpne3Q8BT60 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpne3Q8BT60 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpne3Q8BT60 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cpne3Q8BT60 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpne3Q8BT60 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpne3Q8BT60 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms