Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scfd1Q8BRF7 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Zfp783-201ENSMUST00000095946 670 ntBASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scfd1Q8BRF7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scfd1Q8BRF7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scfd1Q8BRF7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Scfd1Q8BRF7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scfd1Q8BRF7 Gm15378-201ENSMUST00000121894 207 ntBASIC21.15■□□□□ 0.98
Scfd1Q8BRF7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scfd1Q8BRF7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.15■□□□□ 0.98
Scfd1Q8BRF7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scfd1Q8BRF7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Scfd1Q8BRF7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scfd1Q8BRF7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scfd1Q8BRF7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.14■□□□□ 0.97
Scfd1Q8BRF7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scfd1Q8BRF7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scfd1Q8BRF7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scfd1Q8BRF7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scfd1Q8BRF7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scfd1Q8BRF7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scfd1Q8BRF7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scfd1Q8BRF7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scfd1Q8BRF7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scfd1Q8BRF7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scfd1Q8BRF7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Scfd1Q8BRF7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scfd1Q8BRF7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.11■□□□□ 0.97
Scfd1Q8BRF7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scfd1Q8BRF7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scfd1Q8BRF7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scfd1Q8BRF7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Gm6576-201ENSMUST00000169678 883 ntBASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scfd1Q8BRF7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Mtag2-201ENSMUST00000058665 714 ntBASIC21.09■□□□□ 0.97
Scfd1Q8BRF7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms