Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc3Q8BPK2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.37■□□□□ 0.37
Zcchc3Q8BPK2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc3Q8BPK2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc3Q8BPK2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc3Q8BPK2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc3Q8BPK2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc3Q8BPK2 Gm42778-201ENSMUST00000199644 553 ntBASIC17.35■□□□□ 0.37
Zcchc3Q8BPK2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Zcchc3Q8BPK2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc3Q8BPK2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Gm10493-201ENSMUST00000097270 612 ntBASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc3Q8BPK2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Zcchc3Q8BPK2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Zcchc3Q8BPK2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zcchc3Q8BPK2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zcchc3Q8BPK2 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.33■□□□□ 0.37
Zcchc3Q8BPK2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc3Q8BPK2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Gm13534-201ENSMUST00000121169 513 ntBASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc3Q8BPK2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zcchc3Q8BPK2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zcchc3Q8BPK2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zcchc3Q8BPK2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zcchc3Q8BPK2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zcchc3Q8BPK2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zcchc3Q8BPK2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zcchc3Q8BPK2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms