Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
VmacQ8BP01 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VmacQ8BP01 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.31■■□□□ 1
VmacQ8BP01 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.31■■□□□ 1
VmacQ8BP01 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.3■■□□□ 1
VmacQ8BP01 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.3■■□□□ 1
VmacQ8BP01 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
VmacQ8BP01 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VmacQ8BP01 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.29■■□□□ 1
VmacQ8BP01 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VmacQ8BP01 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VmacQ8BP01 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.29■■□□□ 1
VmacQ8BP01 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.29■■□□□ 1
VmacQ8BP01 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.29■■□□□ 1
VmacQ8BP01 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VmacQ8BP01 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VmacQ8BP01 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.29■■□□□ 1
VmacQ8BP01 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VmacQ8BP01 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VmacQ8BP01 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
VmacQ8BP01 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
VmacQ8BP01 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VmacQ8BP01 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.28■■□□□ 1
VmacQ8BP01 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.28■■□□□ 1
VmacQ8BP01 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.28■■□□□ 1
VmacQ8BP01 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VmacQ8BP01 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.28■■□□□ 1
VmacQ8BP01 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.28■■□□□ 1
VmacQ8BP01 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VmacQ8BP01 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VmacQ8BP01 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VmacQ8BP01 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
VmacQ8BP01 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.27■■□□□ 1
VmacQ8BP01 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VmacQ8BP01 Gm26524-201ENSMUST00000192339 390 ntBASIC21.27■■□□□ 1
VmacQ8BP01 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VmacQ8BP01 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VmacQ8BP01 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VmacQ8BP01 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.27■■□□□ 1
VmacQ8BP01 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
VmacQ8BP01 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
VmacQ8BP01 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
VmacQ8BP01 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VmacQ8BP01 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VmacQ8BP01 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VmacQ8BP01 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VmacQ8BP01 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VmacQ8BP01 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VmacQ8BP01 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
VmacQ8BP01 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VmacQ8BP01 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VmacQ8BP01 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VmacQ8BP01 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VmacQ8BP01 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VmacQ8BP01 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VmacQ8BP01 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VmacQ8BP01 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VmacQ8BP01 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VmacQ8BP01 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VmacQ8BP01 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VmacQ8BP01 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VmacQ8BP01 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VmacQ8BP01 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VmacQ8BP01 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VmacQ8BP01 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.24■□□□□ 0.99
VmacQ8BP01 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.24■□□□□ 0.99
VmacQ8BP01 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VmacQ8BP01 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VmacQ8BP01 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
VmacQ8BP01 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.23■□□□□ 0.99
VmacQ8BP01 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
VmacQ8BP01 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VmacQ8BP01 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.23■□□□□ 0.99
VmacQ8BP01 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.23■□□□□ 0.99
VmacQ8BP01 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VmacQ8BP01 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VmacQ8BP01 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VmacQ8BP01 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VmacQ8BP01 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
VmacQ8BP01 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VmacQ8BP01 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms