Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim23Q8BGX0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Trim23Q8BGX0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim23Q8BGX0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trim23Q8BGX0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.78■□□□□ 0.44
Trim23Q8BGX0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim23Q8BGX0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim23Q8BGX0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim23Q8BGX0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trim23Q8BGX0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim23Q8BGX0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim23Q8BGX0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim23Q8BGX0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim23Q8BGX0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim23Q8BGX0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim23Q8BGX0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim23Q8BGX0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Gm22325-201ENSMUST00000158904 308 ntBASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Gm44549-201ENSMUST00000208351 577 ntBASIC17.76■□□□□ 0.43
Trim23Q8BGX0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim23Q8BGX0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.75■□□□□ 0.43
Trim23Q8BGX0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim23Q8BGX0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms