Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vrk1Q80X41 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vrk1Q80X41 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vrk1Q80X41 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vrk1Q80X41 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Gm10698-201ENSMUST00000182663 604 ntBASIC17.58■□□□□ 0.4
Vrk1Q80X41 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vrk1Q80X41 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.57■□□□□ 0.4
Vrk1Q80X41 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vrk1Q80X41 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vrk1Q80X41 Gm15378-201ENSMUST00000121894 207 ntBASIC17.57■□□□□ 0.4
Vrk1Q80X41 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vrk1Q80X41 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vrk1Q80X41 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.57■□□□□ 0.4
Vrk1Q80X41 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.57■□□□□ 0.4
Vrk1Q80X41 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.57■□□□□ 0.4
Vrk1Q80X41 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vrk1Q80X41 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Vrk1Q80X41 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vrk1Q80X41 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vrk1Q80X41 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.57■□□□□ 0.4
Vrk1Q80X41 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vrk1Q80X41 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Gm13158-201ENSMUST00000122007 736 ntBASIC17.56■□□□□ 0.4
Vrk1Q80X41 Gm22325-201ENSMUST00000158904 308 ntBASIC17.56■□□□□ 0.4
Vrk1Q80X41 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.56■□□□□ 0.4
Vrk1Q80X41 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.56■□□□□ 0.4
Vrk1Q80X41 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vrk1Q80X41 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Gm715-201ENSMUST00000117865 831 ntBASIC17.55■□□□□ 0.4
Vrk1Q80X41 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.55■□□□□ 0.4
Vrk1Q80X41 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vrk1Q80X41 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.55■□□□□ 0.4
Vrk1Q80X41 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vrk1Q80X41 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vrk1Q80X41 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vrk1Q80X41 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vrk1Q80X41 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.54■□□□□ 0.4
Vrk1Q80X41 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.54■□□□□ 0.4
Vrk1Q80X41 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vrk1Q80X41 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.54■□□□□ 0.4
Vrk1Q80X41 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vrk1Q80X41 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vrk1Q80X41 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vrk1Q80X41 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.53■□□□□ 0.4
Vrk1Q80X41 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.53■□□□□ 0.4
Vrk1Q80X41 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vrk1Q80X41 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms