Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.49■□□□□ 0.55
Usp8Q80U87 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Usp8Q80U87 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Usp8Q80U87 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Usp8Q80U87 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.49■□□□□ 0.55
Usp8Q80U87 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.49■□□□□ 0.55
Usp8Q80U87 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.49■□□□□ 0.55
Usp8Q80U87 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Usp8Q80U87 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Usp8Q80U87 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp8Q80U87 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp8Q80U87 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.48■□□□□ 0.55
Usp8Q80U87 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Usp8Q80U87 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp8Q80U87 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.48■□□□□ 0.55
Usp8Q80U87 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp8Q80U87 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp8Q80U87 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Usp8Q80U87 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Usp8Q80U87 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.48■□□□□ 0.55
Usp8Q80U87 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp8Q80U87 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Usp8Q80U87 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.48■□□□□ 0.55
Usp8Q80U87 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp8Q80U87 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.48■□□□□ 0.55
Usp8Q80U87 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Usp8Q80U87 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp8Q80U87 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp8Q80U87 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp8Q80U87 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp8Q80U87 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp8Q80U87 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp8Q80U87 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp8Q80U87 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp8Q80U87 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp8Q80U87 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.47■□□□□ 0.55
Usp8Q80U87 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Usp8Q80U87 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp8Q80U87 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Usp8Q80U87 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp8Q80U87 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp8Q80U87 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Usp8Q80U87 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Usp8Q80U87 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.46■□□□□ 0.55
Usp8Q80U87 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.46■□□□□ 0.55
Usp8Q80U87 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Usp8Q80U87 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp8Q80U87 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp8Q80U87 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp8Q80U87 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp8Q80U87 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp8Q80U87 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp8Q80U87 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Usp8Q80U87 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp8Q80U87 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp8Q80U87 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp8Q80U87 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp8Q80U87 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.45■□□□□ 0.54
Usp8Q80U87 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Usp8Q80U87 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.45■□□□□ 0.54
Usp8Q80U87 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Usp8Q80U87 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Usp8Q80U87 Gm43060-201ENSMUST00000200621 289 ntBASIC18.44■□□□□ 0.54
Usp8Q80U87 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.44■□□□□ 0.54
Usp8Q80U87 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp8Q80U87 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp8Q80U87 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp8Q80U87 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.43■□□□□ 0.54
Usp8Q80U87 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Usp8Q80U87 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp8Q80U87 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms