Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Gm22238-201ENSMUST00000175222 88 ntBASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TwistnbQ78WZ7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
TwistnbQ78WZ7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TwistnbQ78WZ7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TwistnbQ78WZ7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TwistnbQ78WZ7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TwistnbQ78WZ7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TwistnbQ78WZ7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TwistnbQ78WZ7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.77■□□□□ 0.59
TwistnbQ78WZ7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TwistnbQ78WZ7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TwistnbQ78WZ7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TwistnbQ78WZ7 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.75■□□□□ 0.59
TwistnbQ78WZ7 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.75■□□□□ 0.59
TwistnbQ78WZ7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TwistnbQ78WZ7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TwistnbQ78WZ7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms