Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim45Q6PFY8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim45Q6PFY8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Gm10602-201ENSMUST00000098239 609 ntBASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim45Q6PFY8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim45Q6PFY8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim45Q6PFY8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim45Q6PFY8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.42■□□□□ 0.38
Trim45Q6PFY8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim45Q6PFY8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim45Q6PFY8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Gm7860-201ENSMUST00000121190 879 ntBASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim45Q6PFY8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim45Q6PFY8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms