Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Nup98Q6PFD9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nup98Q6PFD9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Nup98Q6PFD9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nup98Q6PFD9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nup98Q6PFD9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Nup98Q6PFD9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nup98Q6PFD9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Nup98Q6PFD9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nup98Q6PFD9 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.95■■□□□ 1.1
Nup98Q6PFD9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.95■■□□□ 1.1
Nup98Q6PFD9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nup98Q6PFD9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nup98Q6PFD9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nup98Q6PFD9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nup98Q6PFD9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nup98Q6PFD9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nup98Q6PFD9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nup98Q6PFD9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Gm12382-201ENSMUST00000122005 922 ntBASIC21.94■■□□□ 1.1
Nup98Q6PFD9 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Gm10138-203ENSMUST00000206952 366 ntBASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nup98Q6PFD9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nup98Q6PFD9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nup98Q6PFD9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nup98Q6PFD9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nup98Q6PFD9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
Nup98Q6PFD9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nup98Q6PFD9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Nup98Q6PFD9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Gm37292-201ENSMUST00000192062 758 ntBASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nup98Q6PFD9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nup98Q6PFD9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Gm42545-201ENSMUST00000202755 922 ntBASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Mir6349-201ENSMUST00000184059 97 ntBASIC21.9■■□□□ 1.1
Nup98Q6PFD9 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Nup98Q6PFD9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nup98Q6PFD9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nup98Q6PFD9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nup98Q6PFD9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nup98Q6PFD9 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.89■■□□□ 1.09
Nup98Q6PFD9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nup98Q6PFD9 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms