Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dhx40Q6PE54 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Gm8493-201ENSMUST00000196881 489 ntBASIC20.5■□□□□ 0.87
Dhx40Q6PE54 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dhx40Q6PE54 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Dhx40Q6PE54 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Dhx40Q6PE54 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Dhx40Q6PE54 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.49■□□□□ 0.87
Dhx40Q6PE54 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.49■□□□□ 0.87
Dhx40Q6PE54 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dhx40Q6PE54 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dhx40Q6PE54 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dhx40Q6PE54 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Dhx40Q6PE54 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dhx40Q6PE54 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dhx40Q6PE54 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Gm38205-201ENSMUST00000192243 258 ntBASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dhx40Q6PE54 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Dhx40Q6PE54 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.45■□□□□ 0.86
Dhx40Q6PE54 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Dhx40Q6PE54 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.44■□□□□ 0.86
Dhx40Q6PE54 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Dhx40Q6PE54 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.44■□□□□ 0.86
Dhx40Q6PE54 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Dhx40Q6PE54 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms