Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.63■□□□□ 0.89
Abcf1Q6P542 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcf1Q6P542 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.62■□□□□ 0.89
Abcf1Q6P542 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Abcf1Q6P542 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcf1Q6P542 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abcf1Q6P542 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abcf1Q6P542 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abcf1Q6P542 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.61■□□□□ 0.89
Abcf1Q6P542 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Abcf1Q6P542 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abcf1Q6P542 Gm8495-201ENSMUST00000188740 694 ntBASIC20.61■□□□□ 0.89
Abcf1Q6P542 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abcf1Q6P542 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abcf1Q6P542 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abcf1Q6P542 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.6■□□□□ 0.89
Abcf1Q6P542 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcf1Q6P542 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcf1Q6P542 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcf1Q6P542 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcf1Q6P542 Gm5874-201ENSMUST00000096101 508 ntBASIC20.59■□□□□ 0.89
Abcf1Q6P542 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Abcf1Q6P542 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcf1Q6P542 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcf1Q6P542 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Abcf1Q6P542 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcf1Q6P542 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Abcf1Q6P542 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Abcf1Q6P542 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Abcf1Q6P542 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Abcf1Q6P542 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abcf1Q6P542 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Abcf1Q6P542 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abcf1Q6P542 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Abcf1Q6P542 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Abcf1Q6P542 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.57■□□□□ 0.88
Abcf1Q6P542 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abcf1Q6P542 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abcf1Q6P542 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.57■□□□□ 0.88
Abcf1Q6P542 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.57■□□□□ 0.88
Abcf1Q6P542 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abcf1Q6P542 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.57■□□□□ 0.88
Abcf1Q6P542 Gm10493-201ENSMUST00000097270 612 ntBASIC20.57■□□□□ 0.88
Abcf1Q6P542 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Abcf1Q6P542 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.57■□□□□ 0.88
Abcf1Q6P542 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abcf1Q6P542 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms