Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.68■□□□□ 0.9
Hdac4Q6NZM9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.68■□□□□ 0.9
Hdac4Q6NZM9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac4Q6NZM9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac4Q6NZM9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac4Q6NZM9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Hdac4Q6NZM9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.66■□□□□ 0.9
Hdac4Q6NZM9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac4Q6NZM9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.66■□□□□ 0.9
Hdac4Q6NZM9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac4Q6NZM9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac4Q6NZM9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac4Q6NZM9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac4Q6NZM9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac4Q6NZM9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.64■□□□□ 0.9
Hdac4Q6NZM9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Hdac4Q6NZM9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac4Q6NZM9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac4Q6NZM9 Gm8495-201ENSMUST00000188740 694 ntBASIC20.64■□□□□ 0.89
Hdac4Q6NZM9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac4Q6NZM9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac4Q6NZM9 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.64■□□□□ 0.89
Hdac4Q6NZM9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac4Q6NZM9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.63■□□□□ 0.89
Hdac4Q6NZM9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.63■□□□□ 0.89
Hdac4Q6NZM9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.63■□□□□ 0.89
Hdac4Q6NZM9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac4Q6NZM9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac4Q6NZM9 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.63■□□□□ 0.89
Hdac4Q6NZM9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac4Q6NZM9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac4Q6NZM9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac4Q6NZM9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac4Q6NZM9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac4Q6NZM9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac4Q6NZM9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac4Q6NZM9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Hdac4Q6NZM9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.6■□□□□ 0.89
Hdac4Q6NZM9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac4Q6NZM9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac4Q6NZM9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac4Q6NZM9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac4Q6NZM9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Hdac4Q6NZM9 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.59■□□□□ 0.89
Hdac4Q6NZM9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac4Q6NZM9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac4Q6NZM9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Hdac4Q6NZM9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms