Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Gm13146-201ENSMUST00000118508 780 ntBASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.82■□□□□ 0.76
Retreg2Q6NS82 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retreg2Q6NS82 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retreg2Q6NS82 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retreg2Q6NS82 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Retreg2Q6NS82 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retreg2Q6NS82 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Retreg2Q6NS82 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.77■□□□□ 0.76
Retreg2Q6NS82 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retreg2Q6NS82 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.77■□□□□ 0.76
Retreg2Q6NS82 Gm6365-201ENSMUST00000054711 744 ntBASIC19.77■□□□□ 0.76
Retreg2Q6NS82 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.77■□□□□ 0.76
Retreg2Q6NS82 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retreg2Q6NS82 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retreg2Q6NS82 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retreg2Q6NS82 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Gm13148-201ENSMUST00000118892 745 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms