Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctnna3Q65CL1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Gm13146-201ENSMUST00000118508 780 ntBASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctnna3Q65CL1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Gm13168-201ENSMUST00000121771 632 ntBASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctnna3Q65CL1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctnna3Q65CL1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ctnna3Q65CL1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Mir7071-201ENSMUST00000184847 69 ntBASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Gm6365-201ENSMUST00000054711 744 ntBASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ctnna3Q65CL1 Grk6-206ENSMUST00000224995 2971 ntBASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.65■□□□□ 0.9
Ctnna3Q65CL1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms