Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AtmQ62388 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AtmQ62388 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AtmQ62388 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AtmQ62388 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
AtmQ62388 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.6■□□□□ 0.41
AtmQ62388 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
AtmQ62388 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AtmQ62388 Gm18959-201ENSMUST00000208954 655 ntBASIC17.6■□□□□ 0.41
AtmQ62388 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.6■□□□□ 0.41
AtmQ62388 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
AtmQ62388 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.59■□□□□ 0.41
AtmQ62388 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
AtmQ62388 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.59■□□□□ 0.41
AtmQ62388 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
AtmQ62388 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
AtmQ62388 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
AtmQ62388 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.58■□□□□ 0.41
AtmQ62388 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
AtmQ62388 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.58■□□□□ 0.41
AtmQ62388 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
AtmQ62388 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
AtmQ62388 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.58■□□□□ 0.4
AtmQ62388 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.58■□□□□ 0.4
AtmQ62388 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
AtmQ62388 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.58■□□□□ 0.4
AtmQ62388 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AtmQ62388 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AtmQ62388 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AtmQ62388 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.58■□□□□ 0.4
AtmQ62388 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AtmQ62388 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AtmQ62388 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.57■□□□□ 0.4
AtmQ62388 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AtmQ62388 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
AtmQ62388 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AtmQ62388 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
AtmQ62388 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.56■□□□□ 0.4
AtmQ62388 Gm18032-201ENSMUST00000222541 538 ntBASIC17.56■□□□□ 0.4
AtmQ62388 Timm23-208ENSMUST00000226683 750 ntBASIC17.56■□□□□ 0.4
AtmQ62388 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AtmQ62388 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
AtmQ62388 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AtmQ62388 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AtmQ62388 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AtmQ62388 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AtmQ62388 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
AtmQ62388 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AtmQ62388 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.56■□□□□ 0.4
AtmQ62388 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AtmQ62388 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.56■□□□□ 0.4
AtmQ62388 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AtmQ62388 Gm11927-201ENSMUST00000118472 759 ntBASIC17.56■□□□□ 0.4
AtmQ62388 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AtmQ62388 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AtmQ62388 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AtmQ62388 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AtmQ62388 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AtmQ62388 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AtmQ62388 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AtmQ62388 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.55■□□□□ 0.4
AtmQ62388 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.55■□□□□ 0.4
AtmQ62388 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AtmQ62388 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AtmQ62388 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
AtmQ62388 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
AtmQ62388 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AtmQ62388 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AtmQ62388 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AtmQ62388 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AtmQ62388 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AtmQ62388 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AtmQ62388 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.53■□□□□ 0.4
AtmQ62388 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.53■□□□□ 0.4
AtmQ62388 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms