Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Zic4Q61467 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Zic4Q61467 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Zic4Q61467 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Zic4Q61467 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.96□□□□□ -0.01
Zic4Q61467 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Gm8969-201ENSMUST00000199694 526 ntBASIC14.96□□□□□ -0.01
Zic4Q61467 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.96□□□□□ -0.01
Zic4Q61467 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Zic4Q61467 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Zic4Q61467 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Zic4Q61467 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Zic4Q61467 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Zic4Q61467 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zic4Q61467 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zic4Q61467 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zic4Q61467 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zic4Q61467 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.95□□□□□ -0.02
Zic4Q61467 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zic4Q61467 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.95□□□□□ -0.02
Zic4Q61467 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zic4Q61467 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zic4Q61467 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Zic4Q61467 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Zic4Q61467 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Zic4Q61467 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.94□□□□□ -0.02
Zic4Q61467 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.94□□□□□ -0.02
Zic4Q61467 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.94□□□□□ -0.02
Zic4Q61467 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Zic4Q61467 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.94□□□□□ -0.02
Zic4Q61467 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Zic4Q61467 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.94□□□□□ -0.02
Zic4Q61467 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Zic4Q61467 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Zic4Q61467 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Zic4Q61467 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Zic4Q61467 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.93□□□□□ -0.02
Zic4Q61467 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.93□□□□□ -0.02
Zic4Q61467 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.93□□□□□ -0.02
Zic4Q61467 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Zic4Q61467 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zic4Q61467 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zic4Q61467 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.92□□□□□ -0.02
Zic4Q61467 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.92□□□□□ -0.02
Zic4Q61467 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Zic4Q61467 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zic4Q61467 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zic4Q61467 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Zic4Q61467 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Zic4Q61467 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zic4Q61467 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zic4Q61467 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zic4Q61467 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Zic4Q61467 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.92□□□□□ -0.02
Zic4Q61467 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Zic4Q61467 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.91□□□□□ -0.02
Zic4Q61467 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Zic4Q61467 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms