Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Ubr3Q5U430 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Ubr3Q5U430 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.69■■□□□ 1.22
Ubr3Q5U430 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ubr3Q5U430 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Ubr3Q5U430 Ank2-226ENSMUST00000189368 339 ntBASIC22.69■■□□□ 1.22
Ubr3Q5U430 Gm45058-201ENSMUST00000205810 766 ntBASIC22.69■■□□□ 1.22
Ubr3Q5U430 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Ubr3Q5U430 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ubr3Q5U430 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ubr3Q5U430 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.69■■□□□ 1.22
Ubr3Q5U430 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC22.69■■□□□ 1.22
Ubr3Q5U430 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ubr3Q5U430 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ubr3Q5U430 AC154471.1-201ENSMUST00000224418 436 ntBASIC22.68■■□□□ 1.22
Ubr3Q5U430 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ubr3Q5U430 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC22.68■■□□□ 1.22
Ubr3Q5U430 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Gm14464-201ENSMUST00000119658 1254 ntBASIC22.68■■□□□ 1.22
Ubr3Q5U430 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.68■■□□□ 1.22
Ubr3Q5U430 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ubr3Q5U430 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ubr3Q5U430 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Ubr3Q5U430 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ubr3Q5U430 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ubr3Q5U430 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ubr3Q5U430 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Ubr3Q5U430 Gm17971-201ENSMUST00000190239 806 ntBASIC22.66■■□□□ 1.22
Ubr3Q5U430 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ubr3Q5U430 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ubr3Q5U430 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC22.66■■□□□ 1.22
Ubr3Q5U430 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ubr3Q5U430 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ubr3Q5U430 Mir2861-201ENSMUST00000175539 82 ntBASIC22.66■■□□□ 1.22
Ubr3Q5U430 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC22.66■■□□□ 1.22
Ubr3Q5U430 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ubr3Q5U430 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ubr3Q5U430 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ubr3Q5U430 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ubr3Q5U430 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ubr3Q5U430 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ubr3Q5U430 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ubr3Q5U430 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ubr3Q5U430 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ubr3Q5U430 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ubr3Q5U430 Gm10654-201ENSMUST00000098653 1633 ntBASIC22.65■■□□□ 1.22
Ubr3Q5U430 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
Ubr3Q5U430 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ubr3Q5U430 Gm9103-201ENSMUST00000119371 405 ntBASIC22.64■■□□□ 1.22
Ubr3Q5U430 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC22.64■■□□□ 1.22
Ubr3Q5U430 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.64■■□□□ 1.22
Ubr3Q5U430 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ubr3Q5U430 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ubr3Q5U430 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Ubr3Q5U430 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC22.64■■□□□ 1.21
Ubr3Q5U430 AC134329.2-201ENSMUST00000217897 428 ntBASIC22.64■■□□□ 1.21
Ubr3Q5U430 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ubr3Q5U430 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC22.64■■□□□ 1.21
Ubr3Q5U430 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ubr3Q5U430 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ubr3Q5U430 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.63■■□□□ 1.21
Ubr3Q5U430 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ubr3Q5U430 Gm12085-201ENSMUST00000119263 940 ntBASIC22.62■■□□□ 1.21
Ubr3Q5U430 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ubr3Q5U430 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ubr3Q5U430 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ubr3Q5U430 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ubr3Q5U430 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ubr3Q5U430 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ubr3Q5U430 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr3Q5U430 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ubr3Q5U430 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr3Q5U430 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Ubr3Q5U430 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC22.61■■□□□ 1.21
Ubr3Q5U430 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ubr3Q5U430 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr3Q5U430 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr3Q5U430 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ubr3Q5U430 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ubr3Q5U430 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ubr3Q5U430 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.6■■□□□ 1.21
Ubr3Q5U430 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ubr3Q5U430 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms